- Open Access
Tape-Arabidopsis Sandwich - a simpler Arabidopsis protoplast isolation method
© Wu et al; licensee BioMed Central Ltd. 2009
- Received: 7 October 2009
- Accepted: 24 November 2009
- Published: 24 November 2009
Protoplasts isolated from leaves are useful materials in plant research. One application, the transient expression of recombinant genes using Arabidopsis mesophyll protoplasts (TEAMP), is currently commonly used for studies of subcellular protein localization, promoter activity, and in vivo protein-protein interactions. This method requires cutting leaves into very thin slivers to collect mesophyll cell protoplasts, a procedure that often causes cell damage, may yield only a few good protoplasts, and is time consuming. In addition, this protoplast isolation method normally requires a large number of leaves derived from plants grown specifically under low-light conditions, which may be a concern when material availability is limited such as with mutant plants, or in large scale experiments.
In this report, we present a new procedure that we call the Tape-Arabidopsis Sandwich. This is a simple and fast mesophyll protoplast isolation method. Two kinds of tape (Time tape adhered to the upper epidermis and 3 M Magic tape to the lower epidermis) are used to make a "Tape-Arabidopsis Sandwich". The Time tape supports the top side of the leaf during manipulation, while tearing off the 3 M Magic tape allows easy removal of the lower epidermal layer and exposes mesophyll cells to cell wall digesting enzymes when the leaf is later incubated in an enzyme solution. The protoplasts released into solution are collected and washed for further use. For TEAMP, plasmids carrying a gene expression cassette for a fluorescent protein can be successfully delivered into protoplasts isolated from mature leaves grown under optimal conditions. Alternatively, these protoplasts may be used for bimolecular fluorescence complementation (BiFC) to investigate protein-protein interactions in vivo, or for Western blot analysis. A significant advantage of this protocol over the current method is that it allows the generation of protoplasts in less than 1 hr, and allows TEAMP transfection to be carried out within 2 hr.
The protoplasts generated by this new Tape-Arabidopsis Sandwich method are suitable for the same range of research applications as those that use the current method, but require less operator skill, equipment and time.
- Mesophyll Cell
- Protoplast Isolation
- Arabidopsis Protoplast
- Bimolecular Fluorescence Complementation
- Arabidopsis Mesophyll Protoplast
Plant cells are usually protected by a rigid cell wall comprised of cellulose that provides structural support for the plant. The cell wall can be digested away by an enzyme cocktail containing cellulase and macerozyme, resulting in membrane-bound protoplasts. A variety of different transfection techniques, such as PEG-mediated, electroportation, and microinjection, can then be used to deliver recombinant DNA plasmids into the protoplasts. The transfected protoplasts are then used for further investigations.
In Arabidopsis research, protoplast transfection is well established [1–3]. A protocol that has become popular in recent years , transient expression in Arabidopsis mesophyll protoplasts (TEAMP), uses Arabidopsis plants grown in pots as opposed to cells in suspension culture. One advantage of this technique is that it is not necessary to maintain the material in a sterile environment. Also, there is no need to generate suspension cultures, which is time-consuming and often difficult to accomplish with many Arabidopsis mutants and ecotypes. There is also an increased likelihood that these protoplasts maintain in planta physiology and responses to signal transduction. TEAMP thus has a wide range of applications in plant investigation .
The current method of protoplast isolation has several drawbacks that limit its utility. First is the need for strict control of plant growth environment, as some environmental changes will result in reduced transfection efficiency . Because Arabidopsis is sensitive to environmental changes, it must be grown under conditions of both relatively short photoperiod and low light for optimal efficiency of TEAMP . The second drawback is the necessity to slice leaves manually. Successful cell isolations require that the leaf is cut into 0.5-1 mm strips, on a suitable support, without crushing the leaf tissue at the cutting site. The blade must be changed after every four or five leaves. A third concern is the length of time required. It takes 4-5 hr to isolate the protoplasts and 6-7 hr to obtain the transfected protoplasts. Therefore, success with the current protocol needs a high degree of skill and much experience.
In tobacco , cereals , and Arabidopsis, the leaf epidermal layer can be peeled away from the leaf using forceps with operator skill, so that mesophyll cells can be exposed to the digestion buffer without the epidermis obstructing access. In this report, we describe a simple method that does not suffer from any of the limitations described above. Using two different kinds of tape, the epidermal cells are simply peeled away from the leaf, allowing the enzyme solution access to the intercellular space in order to prepare the protoplasts.
Plant Material and Growth Conditions
Arabidopsis thaliana plants were grown in a mixture of vermiculite, perlite, and peat moss at a 1:1:1 ratio in an environmentally-controlled chamber with a long photoperiod (16 hr light and 8 hr dark) at 22°C. The transgenic lines and plasmids were obtained from the Arabidopsis Biological Resource Center (ABRC, Columbus, OH), and had been deposited by Dr. B.K. Nelson .
Leaves (width: 2 cm, length: 5 cm in optimal light condition; width: 0.5 cm; length: 2.5 cm in low light conditions) were collected from 3 to 5-week-old plants grown under optimal light (ca. 150 μE·m-2·s-1) or low light (ca. 50·μE m-2·s-1) conditions. Arabidopsis protoplasts were isolated in two ways. First, to recreate the current technique, protoplasts were made according to the procedure of Yoo et al. . Second, in a new technique, selected leaves were used in a 'Tape-Arabidopsis Sandwich' experiment. The upper epidermal surface was stabilized by affixing a strip of Time tape (Time Med, Burr Ridge, IL) while the lower epidermal surface was affixed to a strip of Magic tape (3 M, St. Paul, MN). The Magic tape was then carefully pulled away from the Time tape, peeling away the lower epidermal surface cell layer. The peeled leaves (7 to 10 optimal-light-growth leaves, about 1-2 g, up to 5 g), still adhering to the Time tape, were transferred to a Petri dish containing 10 mL of enzyme solution [1% cellulase 'Onozuka' R10 (Yakult, Tokyo, Japan), 0.25% macerozyme 'Onozuka' R10 (Yakult), 0.4 M mannitol, 10 mM CaCl2, 20 mM KCl, 0.1% BSA and 20 mM MES, pH 5.7]. The leaves were gently shaken (40 rpm on a platform shaker) in light for 20 to 60 min until the protoplasts were released into the solution. The protoplasts were centrifuged at 100 × g for 3 min in an Eppendorff A-4-44 rotor (Hamburg, Germany), washed twice with 25 mL of pre-chilled modified W5 solution (154 mM NaCl, 125 mM CaCl2, 5 mM KCl, 5 mM glucose, and 2 mM MES, pH 5.7) and incubated on ice for 30 min. During the incubation period, protoplasts were counted using a hemocytometer under a light microscope. The protoplasts were then centrifuged and resuspended in modified MMg solution (0.4 M mannitol, 15 mM MgCl2, and 4 mM MES, pH 5.7) to a final concentration of 2 to 5 × 105 cells/mL.
Protoplast Transfection Assays
Protoplasts were transfected by a modified TEAMP method . Approximately 5 × 104 protoplasts (2 × 104 to 1 × 105) in 0.2 mL of MMg solution were mixed with approximately 30 (20 to 40) μg of plasmid DNA at room temperature. An equal volume of a freshly-prepared solution of 40% (w/v) PEG (MW 4000; Fluka) with 0.1 M CaCl2 and 0.2 M mannitol was added, and the mixture was incubated at room temperature for 5 min. After incubation, 3 mL of W5 solution was added slowly, the solution was mixed, and protoplasts were pelleted by centrifugation at 100 × g for 1 min (Eppendorff A-4-44 rotor). This protoplast W5 wash step was repeated twice. The protoplasts were resuspended gently in 1 mL of W5 and were incubated in 6-well plates coated with 1% BSA at room temperature for 16 hr in light.
Confocal Laser Scanning Microscopy
Protoplasts were observed with a Zeiss LSM510 META laser scanning confocal microscope using 20×/0.8 Plan-Apochromat, 40×/1.2 W C-Apochromat or 63×/1.4 Oil Plan-Apochromat in multi-track channel mode. Excitation wavelengths and emission filters were 488 nm/band-pass 505-530 nm for GFP or YFP, 458 nm/band-pass 465-530 nm for CFP, and 488 nm/band-pass 650-710 nm for chloroplast auto-fluorescence. The images are presented as 3D projected stacks of neighboring sections as stated in the figure legends. Image processing was performed using LSM 510 version 4.2 (Zeiss), and the included three-dimensional reconstruction functions were used to compute projections of serial confocal sections.
Tissue was fixed in 2% glutaraldehyde in 25 mM sodium phosphate buffer at pH 6.8, vacuum infiltrated, and incubated at 4°C overnight. Tissue was briefly rinsed in 25 mM sodium phosphate buffer, pH 6.8, and dehydrated in an ethanol series (25, 50, 70, 95, and 100%), with 2 hr in each solution. Then the tissue was incubated through a series of LR white resin/ethanol mixes (25:75, 50:50, 75:25, 100:0 two times) and finally embedded in LR white resin. Using a microtome, 2-μm cross sections were cut and placed on glass slides. These were stained by periodic acid Schiff (PAS) reaction, then water mounted and covered with a cover slip for observation by light microscopy.
Proteins were extracted by homogenizing 105 protoplast cells in 50 μL of 1× lysis buffer (Promega, Madison, WI). Recombinant γGFP (Roche, Mannheim, Germany) was used as a positive control and for quantification. Proteins were separated by SDS-polyacrylamide gel electrophoresis (SDS-PAGE) and then transferred onto a nitrocellulose membrane (Millipore, Billerica, MA). The membrane was incubated first with mouse anti-green fluorescent protein antibody (Roche) and then with rabbit anti-mouse IgG-alkaline phosphatase conjugates (Sigma). The blot was developed using BCIP/NPT Color Development Substrate (Sigma). Immunoblots were digitized and the intensity of the bands measured with Multi Gauge software (Fujifilm, Tokyo, Japan).
A simple method for protoplast isolation
The current standard Arabidopsis mesophyll protoplast isolation protocol is well-established, and has also been used in various modified forms for specific needs . In this protocol, five-week-old plants are used for protoplast isolation. To reduce the time taken from seed to generate protoplasts, 14-d-old plantlets have also been used for protoplast isolation . However, this method consumes many seeds, which is a disadvantage for the study of mutants that have a low seed production phenotype. This report presents an alternative simple, fast, protoplast isolation method for TEAMP that we have named the Tape-Arabidopsis Sandwich method, where material availability poses far less of a limitation.
Effects of plant material on protoplast isolation on protoplast transfection.
Protoplast No. (×107)
Transformation efficiency (%)*
1.8 ± 0.3
64.8 ± 5.8
1.7 ± 2.9
1.4 ± 0.2
66.2 ± 8.4
3.2 ± 5.6
3.7 ± 1.3
53.0 ± 4.0
24.9 ± 10.3
3.0 ± 0.3
60.7 ± 3.2
1.8 ± 3.3
Tape can be used to peel off the epidermis of leaves at any stage of development, from seedlings to mature leaves (Fig. 2C). This protocol is therefore highly advantageous when there are limitations imposed by material availability following specific treatments or in growth-retarded mutants. Not only can any size of leaf be used, but also the plants do not need to be grown under specific conditions, such as low-light conditions. When using the current standard protocol, changes in growth conditions have been reported to affect transfection efficiency . There was no significant difference in transfection efficiency between optimal light and low light conditions in protoplasts isolated by the Tape-Arabidopsis Sandwich method (Table 1). The ability to grow plants under optimal conditions and thus obtain a higher biomass for protoplast isolation will be of much benefit for large scale experiments.
Suitability of protoplasts for study of subcellular localization and protein-protein interactions
The imaging of various fluorescent proteins fused to functional proteins is the method of choice for the study of subcellular localization . Genes encoding fluorescent-tagged proteins such as organelle markers can be transfected into protoplasts for transient expression or into Arabidopsis germ cells to develop stably-transfected plants. The subcellular localization of a specific tagged protein can be examined by fluorescence microscopy. There are many fluorescent organelle marker systems employing proteins of known localization [8, 10, 11]. In this report, we used the system of Nelson et al. .
Many proteins will form a complex with other protein molecules in order to elaborate or modify their function. There are many methods developed to investigate protein-protein interactions. One of these visualization methods, bimolecular fluorescence complementation (BiFC), can observe such interactions in living cells [12–16]. BiFC works by fusing two non-fluorescent halves (N-terminal and C-terminal) of a fluorescent protein to two interacting proteins such that interaction leads to restoration of fluorescence within the cell .
The modified protoplast isolation method, Tape-Arabidopsis Sandwich, presented here allows mesophyll cells to be exposed to a cell wall digesting enzyme solution without macerating the cells. The enzyme solution has much easier access to the intercellular space than in the previous method. Small amounts of leaf tissue (1-2 g, about 6-7 fully expanded leaves) are enough to yield about 107 protoplasts in 1 hr, and these cells are ready for transient transfection within 2 hr. We have also demonstrated here that protoplasts obtained from this protocol can be used for efficient transient transgene expression, localization of different organelle markers, and in BiFC for protein-protein interaction analysis. We believe that this protoplast isolation method could have wide applications and be adopted by many plant researchers.
We thank the ABRC (Columbus, OH) for providing clones and seeds, Prof. Dr. J. Kudla and Institut für Botanik und Botanischer Garten, Universität Münster (Münster, Germany) for providing bZIP63 clones, Tzyy-Jen Chiou, Yi-Fang Tsay, San-Hua Lin, Erh-Min Lai and Shu-Hsing Wu for their valuable comments on this method, and Hsiao-Wei Chen, Mei-Jane Fang and Wann-Neng Jane for their technological support, Prof. Stanton Gelvin for critical reading of the manuscript. This work was supported by Academia Sinica, Taiwan.
- Damm B, Schmidt R, Willmitzer L: Efficient transformation of Arabidopsis thaliana using direct gene transfer to protoplasts. Mol Gen Genet. 1989, 217 (1): 6-12. 10.1007/BF00330935.View ArticlePubMedGoogle Scholar
- Abel S, Theologis A: Transient transformation of Arabidopsis leaf protoplasts: a versatile experimental system to study gene expression. Plant J. 1994, 5 (3): 421-427. 10.1111/j.1365-313X.1994.00421.x.View ArticlePubMedGoogle Scholar
- Sheen J: Signal transduction in maize and Arabidopsis mesophyll protoplasts. Plant Physiol. 2001, 127 (4): 1466-1475. 10.1104/pp.010820.PubMed CentralView ArticlePubMedGoogle Scholar
- Yoo SD, Cho YH, Sheen J: Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis. Nat Protoc. 2007, 2 (7): 1565-1572. 10.1038/nprot.2007.199.View ArticlePubMedGoogle Scholar
- Takebe I, Otsuki Y, Aoki S: Isolation of tobacco mesophyll cells in intact and active state. Plant Cell Physiol. 1968, 9: 115-124.Google Scholar
- Okuno T, Furusawa I: A simple method for isolation of intact mesophyll protoplasts from cereal plants. Plant Cell Physiol. 1977, 18: 1357-1362.Google Scholar
- Riazunnisa K, Padmavathi L, Scheibe R, Raghavendra AS: Preparation of Arabidopsis mesophyll protoplasts with high rates of photosynthesis. Physiol Plant . 2007, 129 (4): 879-886. 10.1111/j.1399-3054.2007.00867.x.View ArticleGoogle Scholar
- Nelson BK, Cai X, Nebenführ A: A multi-color set of in vivo organelle markers for colocalization studies in Arabidopsis and other plants. Plant J. 2007, 51 (6): 1126-1136. 10.1111/j.1365-313X.2007.03212.x.View ArticlePubMedGoogle Scholar
- Zhai Z, Sooksa-nguan T, Vatamaniuk OK: Establishing RNA interference as a reverse-genetic approach for functional analysis in protoplasts. Plant Physiol. 2009, 149 (2): 642-652. 10.1104/pp.108.130260.PubMed CentralView ArticlePubMedGoogle Scholar
- Dhanoa PK, Sinclair AM, Mullen RT, Mathur J: Illuminating subcellular structures and dynamics in plants: a fluorescent protein toolbox. Can J Bot. 2006, 84 (4): 515-522. 10.1139/B06-060.View ArticleGoogle Scholar
- Geldner N, Denervaud-Tendon V, Hyman DL, Mayer U, Stierhof Y-D, Chory J: Rapid, combinatorial analysis of membrane compartments in intact plants with a multi-color marker set. Plant J. 2009, 59 (1): 169-78. 10.1111/j.1365-313X.2009.03851.x.View ArticlePubMedGoogle Scholar
- Lee LY, Fang MJ, Kuang LY, Gelvin SB: Vectors for multi-color bimolecular fluorescence complementation to investigate protein-protein interactions in living plant cells. Plant Meth. 2008, 4: 24-10.1186/1746-4811-4-24.View ArticleGoogle Scholar
- Hu CD, Kerppola TK: Simultaneous visualization of multiple protein interactions in living cells using multicolour fluorescence complementation analysis. Nat Biotechnol. 2003, 21 (5): 539-545. 10.1038/nbt816.PubMed CentralView ArticlePubMedGoogle Scholar
- Walter M, Chaban C, Schutze K, Batistic O, Weckermann K, Nake C, Blazevic D, Grefen C, Schumacher K, Oecking C, Harter K, Kudla J: Visualization of protein interactions in living plant cells using bimolecular fluorescence complementation. Plant J. 2004, 40 (3): 428-438. 10.1111/j.1365-313X.2004.02219.x.View ArticlePubMedGoogle Scholar
- Bracha-Drori K, Shichrur K, Katz A, Oliva M, Angelovici R, Yalovsky S, Ohad N: Detection of protein-protein interactions in plants using bimolecular fluorescence complementation. Plant J. 2004, 40 (5): 419-427. 10.1111/j.1365-313X.2004.02206.x.View ArticlePubMedGoogle Scholar
- Bhat RA, Lahaye T, Panstruga R: The visible touch: In planta visualization of protein-protein interactions by fluorophore-based methods. Plant Meth. 2006, 2: 12-10.1186/1746-4811-2-12.View ArticleGoogle Scholar
- Hu CD, Chinenov Y, Kerppola TK: Visualization of interactions among bZIP and Rel family proteins in living cells using bimolecular fluorescence complementation. Mole Cell. 2002, 9 (4): 789-798. 10.1016/S1097-2765(02)00496-3.View ArticleGoogle Scholar
This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.