Pre-trained protein language model sheds new light on the prediction of Arabidopsis protein–protein interactions

Table 1 Computational time required in different methods^a

	ESM-1b + MLP	TAGPPI	RAPPPID	PIPR	D-SCRIPT
Training epoch	40	10	20	20	10
Total training time	56 s	9.29 h	1.12 h	700 s	7.22 h
Total predicting time^b	0.1 s	583 s	18 s	5 s	82 s

^aAll the training and prediction procedures were processed on a high-performance computer with 20 cores CPU, 256G RAM, and Tesla V100 GPU
^b Total predicting time means the computational time required for processing the C3 test dataset

ISSN: 1746-4811