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Fig. 2 | Plant Methods

Fig. 2

From: TreeJ: an ImageJ plugin for interactive cell lineage reconstruction from static images

Fig. 2

Cell lineage reconstruction and annotation using TreeJ: illustration with a plant embryo. A TreeJ interface showing an A. thaliana 122-cells embryo tracked back over four cell generations. B 3D embryo raw image (scale bar: 10 \(\mu m\)). C 3D segmentation of image shown in B. D Output image of tagged internal tree nodes. E Output image after the back tracking, external parts. F Output image after the back tracking, inner parts. 3D renderings were made using the ImageJ 3D viewer [11]

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