Fig. 4
From: NRTPredictor: identifying rice root cell state in single-cell RNA-seq via ensemble learning
Computational analysis of 110 marker genes. A UMAP shows potential marker genes for rice root cell fate determination. B The marker genes of rice root cell subpopulations have been reported. C Comparison of marker genes selected by MIC_SVM (110 marker genes) using split violin plots. The expression level of marker genes in specific cells is shown on the left (Blue), and the total expression level in the remaining five cell types is shown on the right (Orange). D High expression marker genes screened by Scanpy. E Expression trajectory analysis of 110 marker genes (downward) and all genomes (upward) of rice root cell subpopulations colored by cell type using PAGA. The thicker the line, the closer the cell connection. F KEGG enrichment analysis of 110 marker genes