Table 1 Summary statistics of S. chinensis high-quality (HQ) isoforms and HQ isoforms post Cd-Hit datasets
| Â | HQ Isoforms | HQ Isoforms post Cd-Hit | |||
|---|---|---|---|---|---|
Standard | Long | Standard | Long | Merged | |
Number of sequences | 262,206 | 216,879 | 106,568 | 103,904 | 167,866 |
Total length (Mb) | 568 | 690 | 261 | 347 | 493 |
Longest sequence (bp) | 8373 | 8991 | 8373 | 8991 | 9099 |
Shortest sequence (bp) | 53 | 77 | 69 | 106 | 56 |
Mean sequence length (bp) | 2166 | 3184 | 2451 | 3347 | 2939 |
Median sequence length (bp) | 2094 | 3058 | 2365 | 3232 | 2873 |
Number of sequences > 103 (bp) | 231,231 (88.2%) | 215,162 (99.2%) | 99,680 (93.5%) | 103,082 (99.2%) | 161,419 (96.1%) |
GC content (%) | 42.2 | 41.6 | 41.4 | 41.0 | 41.1 |