Table 3 Statistics of draft Streptocarpus genome assemblies
Assembler | S. grandis | S. kentaniensis |
|---|---|---|
Num. of contigs (> = 0 bp) | 5653 | 1168 |
Num. of contigs (> = 25,000 bp) | 5482 | 1049 |
Num. of contigs (> = 50,000 bp) | 1661 | 194 |
Total length (> = 0 bp) | 1,253,163,518 | 710,000,308 |
Total length (> = 25,000 bp) | 1,249,324,457 | 707,346,651 |
Total length (> = 50,000 bp) | 1,105,422,048 | 677,448,832 |
Total length/genome size (%) | 99.5 | 81.1 |
Estimated 1C genome size (Mb) [13] | 1261 | 876 |
Haploid chromosome number (n) [13] | 16 | 16 |
Largest contig length (bp) | 94,998,679 | 56,620,953 |
Theoretical chromosome size (Mb) | 78.8 | 54.8 |
GC (%) | 38.7 | 38.4 |
N50 | 48,948,889 | 23,428,243 |
N75 | 23,325,262 | 9,463,912 |
L50 | 10 | 11 |
L75 | 18 | 21 |