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Table 1 HiFi genome assembly statistics

From: Species-specific basecallers improve actual accuracy of nanopore sequencing in plants

Haplotype

X. johnsonii

P. stellatum

1

2

1 and 2

1

2

1 and 2

Genome size (Mbp)

1443.23

1436.42

2879.65

654.91

593.36

1248.27

N50 (Mbp)

2.33

2.22

2.25

14.12

10.14

12.51

Contig count

1940

1599

3539

1323

341

1664

Longest contig (Mbp)

21.45

29.62

29.62

39.44

28.58

39.44

Shortest contig (Kbp)

16.31

21.27

16.31

14.57

10.18

10.18

  1. Statistics describing the assembly (both haplotypes and combined haplotypes) contiguity for Phebalium stellatum and Xanthorrhoea johnsonii
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Plant Methods

ISSN: 1746-4811