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Fig. 6 | Plant Methods

Fig. 6

From: A low-cost and open-source solution to automate imaging and analysis of cyst nematode infection assays for Arabidopsis thaliana

Fig. 6

Isolation and quantification of nematodes from images. A A schematic workflow highlighting the steps required for manual and automated nematode counting, and the differences in output. B Isolation of female cyst nematodes from red coloured agar under blue light illumination, and the extracted overlay from the script. C Isolation of encysted nematodes under white light illumination, and the extracted overlay from the script. D Correlation of area of the nematode between manual counts and automatic counts using the script for females and cysts

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Plant Methods

ISSN: 1746-4811