Table 1 Annotation of 8188 bi-allelic polymorphism insertion deletion loci detected across maize genome
From: A cost-effective barcode system for maize genetic discrimination based on bi-allelic InDel markers
InDel annotation | Number of InDels | Percentage |
|---|---|---|
UTR_3_Prime | 371 | 4.53% |
UTR_5_Prime | 210 | 2.56% |
Transcript | 2 | 0.02% |
Downstream | 1482 | 18.10% |
Intergenic | 2622 | 32.02% |
Intron | 1029 | 12.57% |
Splice_site_acceptor | 1 | 0.01% |
Splice_site_donor | 3 | 0.04% |
Splice_site_region | 55 | 0.67% |
Exon | 206 | 2.52% |
Upstream | 2207 | 26.95% |