Table 2 Alignment results of PacBio and ONT data

Total reads

3,112,439

300,000

300,000

Unaligned reads

170,385 (5.5%)

101,892 (34.0%)

8909 (3.0%)

Aligned reads

2,942,054 (94.5%)

198,108 (66.0%)

291,091 (97.0%)

Single-align reads

2,904,280 (93.3%)

182,478 (60.8%)

289,504 (96.5%)

Gapped-align reads

529 (0.02%)

237 (0.08%)

50 (0.02%)

Chimeric reads

37,245 (1.20%)

15,393 (5.13%)

1,537 (0.51%)

Trans-chimeric reads

22,921 (0.74%)

710 (0.24%)

1,296 (0.43%)

Self-chimeric reads

14,324 (0.46%)

14,683 (4.89%)

241 (0.08%)