Skip to main content

Table 2 Summarized statistics for the assembly of Setaria italica Yugu18

From: High-throughput long paired-end sequencing of a Fosmid library by PacBio

Name

num_seqs

sum_len

avg_len

max_len

N50

 < 30 kb

Yugu18_contigs

383

407,498,629

1,063,965

12,402,311

3,758,082

165

Yugu18_scaffold

330

407,887,709

1,236,023

14,943,871

5,196,440

164

  1. Yugu18_ contigs: assembly of the whole-genome sequences from PacBio only
  2. Yugu18_scaffold: assembly of the whole-genome sequences from PacBio and the long paired ends of S1 and S2
Back to article page

Plant Methods

ISSN: 1746-4811