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Table 5 Candidate genes for water use (WU) identified through SEM-GWAS

From: Utilizing trait networks and structural equation models as tools to interpret multi-trait genome-wide association studies

Gene ID

Chr

BP

SNP

Rice Annotation

Putative Function

Reference

LOC_Os01g71990

1

41,718,016

SNP-1.41687755.

P5C

Proline biosynthesis

[66]

LOC_Os04g51350

4

30,410,105

SNP-4.30279060.

MPR25

Plant development

[53]

LOC_Os10g05720

10

2,885,293

SNP-10.2860531.

OsDIL1

Drought tolerance

[52]

  1. Chr: chromosome; BP: gene position in base pairs
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Plant Methods

ISSN: 1746-4811