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Fig. 4 | Plant Methods

Fig. 4

From: Utilizing trait networks and structural equation models as tools to interpret multi-trait genome-wide association studies

Fig. 4

Manhattan plot of direct (affecting each trait without any mediation), indirect (mediated by other phenotypes), and total (sum of all direct and indirect) SNP effects on water use (WU) using SEM-GWAS based on the network learned by the hill climbing algorithm. Each point represents a SNP and the height of the SNP represents the extent of its association with WU

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