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Table 2 QTL associated with the traits KME-survival and canker length for PRR resistance in YG and RB RIL mapping populations screened in hydroponics experiment

From: A hydroponics based high throughput screening system for Phytophthora root rot resistance in chickpea (Cicer arietinum L.)

PopulationTraitChr.QTL nameIntervalDistance (cM)Sizeap.value%VarLOD
YGKME-survivalC7QYGprrkms019001SNP7-31: 9001SNP7-320.0–1.22− 0.2710.00016.32.668
RBKME-survivalC2QRBprrkms01RB-SNP2-32: RB-SNP2-311.5–16.490.1410.0018.12.199
  C3QRBprrkms02RB-SNP3-9: RB-SNP3-9754.66–58.840.1530.0019.62.627
  C4QRBprrkms03RB-SNP-79(C): RB-SNP-72(C)80.53–81.70.1760.00012.62.881
  C6QRBprrkms04RB-SNP6-183(C): RB-SNP6-417(C)74.66–75.820.2590.00027.57.366
  C7QRBprrkms05RB-SNP7-30: RB-SNP-scf136(C)95.25–112.92− 0.1880.00014.53.634
 Canker lengthC2QRBprrck01RB-SNP2-6: RB-SNP2-777.49–79.041.0310.0008.52.403
  C3QRBprrck02RB-SNP3-100(C): RB-SNP3-10562.34–63.711.6290.00021.25.902
  C4QRBprrck03RB-SNP-79(C): RB-SNP-72(C)80.53–81.701.3660.00014.94.378
  C6QRBprrck04RB-SNP-scf200(C): RB-SNP6-322(C)83.31–84.351.2740.00012.93.505
  C7QRBprrck05RB-SNP7-30: RB-SNP-scf136(C)95.25–112.92− 1.3050.00013.62.859
  1. QTL interval names with (C) indicate several co-locating markers at the loci
  2. aPositive and negative values indicate that Yorker and Genesis 114 alleles increased the phenotypic values in the YG population, and 04067-81-2-1-1 and Rupali alleles in the RB population, respectively