Table 2 Types and frequency of sequence mutation in exon 7 of the PDS gene in Fragaria
From: CRISPR/Cas9-mediated mutagenesis of phytoene desaturase in diploid and octoploid strawberry
Sequence variant | Hawaii 4 | Calypso | Non-synonymous amino acid substitution | Frameshift and protein truncation | Amino acid deletion | Putative functional protein |
|---|---|---|---|---|---|---|
− 1:1D | 17 | 4 | – | + | + | – |
− 2:1D | 2 | – | – | + | + | – |
− 2:2D | 10 | 3 | – | + | + | – |
− 1:3D | 11 | 3 | – | – | + | – |
− 4:4D | – | 1 | – | + | + | – |
− 1:5D | 2 | 3 | – | + | + | – |
− 2:6D | 1 | – | – | – | + | – |
− 3:7D | – | 1 | – | + | + | – |
− 5:7D | – | 1 | – | + | + | – |
− 2:9D | 1 | – | – | – | + | – |
− 5:9D | – | 1 | – | – | + | – |
− 6:9D | 1 | – | – | – | + | – |
− 10:9D | 1 | – | – | – | + | – |
− 11:15D | 5 | – | – | – | + | – |
− 1:22D | 1 | – | – | + | + | – |
− 25:27D | 2 | – | – | – | + | – |
− 44:45D | 1 | – | – | + | + | – |
1:3D | 2 | – | – | – | + | – |
1:5D | 1 | – | – | + | + | – |
1:1I | 3 | – | + | + | – | – |
SNV:− 3A and 1:2 | 1 | – | + | + | – | – |
SNV:1A | 1 | – | + | – | – | + |