Table 1 Information types annotated in LEAFDATA
From: LEAFDATA: a literature-curated database for Arabidopsis leaf development
Category | Example | Number |
|---|---|---|
Phenotype | The venation in each as2 leaf lamina was bilaterally asymmetrical | 6559 |
Gene expression | YAB3 is detected in the abaxial regions of the developing leaves | 4617 |
Feature | the AP2/EREBP domain of LEP is located close to the N-terminus of the protein | 731 |
DNA–protein interactions | BES1 binding to the promoter of SAUR-15 | 151 |
Protein–protein interaction | AtCul1 … co-immunoprecipitated with … myc-tagged ASK1 | 345 |
Genetic interaction | se quantitatively and qualitatively enhanced the lobing of as1 … leaves | 382 |
Process | CYCD3;1 … important for the initiation of cell division at the G1 phase in leaves | 348 |
Regulation of gene expression | we conclude that STM negatively regulates AS1 | 171 |
Regulation of process | WRKY53, is an important positive regulator of senescence | 206 |
Regulation of phenotype | NEK6 … promotes biomass levels | 42 |