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Table 2 External links and cross references

From: Exploration of plant genomes in the FLAGdb++ environment

Database Scope and targets Website URL
ABRC Arabidopsis biological resource center http://abrc.osu.edu/
Arabidopsis-TF Classification of transcription factors (At) http://urgv.evry.inra.fr/projects/arabidopsis-TF/
Aramemnon Membrane protein database (At, Os) http://aramemnon.botanik.uni-koeln.de/
ATOMEdb ORFeome resource (At) http://urgv.evry.inra.fr/ATOMEdb
CATdb CATMA Transcriptome database (At) http://urgv.evry.inra.fr/CATdb
eFP Browser Transcriptome database (At, Os, Pt) http://www.bar.utoronto.ca/
GABI-Kat GABI Arabidopsis T-DNA mutants http://www.gabi-kat.de/
GenBank DNA and protein repository at NCBI http://www.ncbi.nlm.nih.gov/
GeneFarm Manually annotation of families (At) http://urgi.versailles.inra.fr/Genefarm/
Genevestigator Transcriptome database (At) http://www.genevestigator.com
Genoscope Genoscope Genome Browser (Vv) http://www.genoscope.cns.fr
IJPB INRA Arabidopsis insertion mutants http://dbsgap.versailles.inra.fr/portail/
InterPro Classification of protein families http://www.ebi.ac.uk/interpro/
JGI DOE Joint Genome Institut (Pt) http://www.jgi.doe.gov/
KOG Clusters of Orthologous Groups (Pt) http://www.ncbi.nlm.nih.gov/COG/
MAtDB Arabidopsis genome at MIPS http://mips.helmholtz-muenchen.de/plant/
PDB Protein structure Data Bank http://www.pdb.org/
PFAM Conserved motifs in protein families http://pfam.sanger.ac.uk/
RAP-DB Rice Annotation Project Database http://rapdb.dna.affrc.go.jp/
SwissProt Manually annotation of proteins http://www.uniprot.org/
TAIR The Arabidopsis Information Resource http://www.arabidopsis.org/
URGI INRA Genome Browser (Vv) http://urgi.versailles.inra.fr/
  1. The cross-references with complementary databases are proposed to the users in the 'Link to...' pop-up menus associated with the concerned features.