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Table 2 The number of over- and under-amplified probes

From: Statistical evaluation of transcriptomic data generated using the Affymetrix one-cycle, two-cycle and IVT-Express RNA labelling protocols with the Arabidopsis ATH1 microarray

  

Number over-amplified loci

Number under-amplified loci

Region

Comparison

Rep 1

Rep 2

Rep 3

Rep 1

Rep 2

Rep 3

MS

1-cyc vs. 2-cyc

35

20

32

143

148

127

MS

IVT-E vs. 2-cyc

37

16

32

87

127

94

EZ

1-cyc vs. 2-cyc

39

46

39

119

107

112

EZ

IVT-E vs. 2-cyc

38

42

35

101

85

93

  1. The number of over- and under-amplified loci for pair-wise comparisons of two-cycle vs. one-cycle and IVT-E protocols for the three replicates (Rep 1-3).
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Plant Methods

ISSN: 1746-4811