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Table 1 Average pairwise percent of polymorphic markers between accessions belonging to the five rice subpopulations. The percent of polymorphic markers is calculated using four accessions per sub-population.

From: Development and evaluation of a high-throughput, low-cost genotyping platform based on oligonucleotide microarrays in rice

Cross

Mean Polymorphism

Temperate Japonica X Temperate Japonica

10.4%

Temperate Japonica X Tropical Japonica

20.1%

Temperate Japonica X Aromatic

24.7%

Temperate Japonica X Aus

37.1%

Temperate Japonica X Indica

46.8%

Tropical Japonica X Tropical Japonica

16.3%

Tropical Japonica X Aromatic

23.3%

Tropical Japonica X Aus

31.8%

Tropical Japonica X Indica

40.2%

Aromatic X Aromatic

18.0%

Aromatic X Aus

29.8%

Aromatic X Indica

38.8%

Aus X Aus

18.0%

Aus X Indica

27.1%

Indica X Indica

25.6%