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Table 5 Correspondence between paralogue copy number A: Estimated from published Southern hybridizations and the colony hybridizations to the MTP. B: Comparison of paralogue number in MTP colony hybridization and by Southern hybridization.

From: Development of a pooled probe method for locating small gene families in a physical map of soybean using stress related paralogues and a BAC minimum tile path

Probe/gene family

Southern estimate of copy number

Reference

MTP estimate of copy number

A:

   

G-box factor

5–7

Hong, et al. (1995)

1

Epoxide hydrolase

5

Arahira et al. (2000)

1

Chalcone synthase

3–7

Estabrook et al., (1991)

1

Phenylalanine ammonia lyase

2–3

Estabrook et al., (1991)

1

ATP synthase

2–3

Smith et al. (1994)

3

Aspartate aminotransferase 1

1–2

Gebhardt et al. (1998)

3

Leghemoglobin.

2

Ji et al. (1994)

3

4-coumarate CoA ligase 1.

1–3

Lindermayr et al. (2002)

5

Calmodulin

4

Lee et al. (1995)

5

Nodulin 22

4–5

Sandal et al. (1987)

5

B:

   

EST BM499228

1

This work

1

EST BI347333

1

This work

3

EST BI273631

3

This work

3

EST BI347330

6

This work

9