Skip to main content

Table 1 Effect of artificial base mismatches on the specificity of allele-specific PCR.

From: Protocol: a simple gel-free method for SNP genotyping using allele-specific primers in rice and other plant species

  

Mismatching base

  

A

T

G

C

Matching base

A

0%

50%

60%

60%

  

(0/10)

(5/10)

(6/10)

(6/10)

 

T

60%

0%

90%

10%

  

(6/10)

(0/10)

(9/10)

(1/10)

 

G

50%

90%

0%

40%

  

(5/10)

(9/10)

(0/10)

(4/10)

 

C

60%

40%

40%

0%

  

(6/10)

(4/10)

(4/10)

(0/10)