Table 1 SPD markers for chromosomes of S. caripense. Summary of number of chromosome-specific COSII primers tested, SNPs detected, and success of genotyping and genetic mapping.
Chromosome (Solanum) | Number of COSII markers tested | Number of SNPs detected | Number of AS SPD primers designed | SPD markers successfully genotyped | SPD markers mapped |
|---|---|---|---|---|---|
I | 7 | 41 | 4 | 3 | 2 |
II | 6 | 40 | 3 | 3 | 2 |
III | 8 | 59 | 2 | 2 | - |
IV | 7 | 55 | 3 | 2 | - |
V | 6 | 30 | 3 | 2 | 2 |
VI | 6 | 17 | 3 | 3 | 3 |
VII | 8 | 38 | 2 | 1 | 1 |
VIII | 6 | 47 | 2 | 1 | 1 |
IX | 4 | 6 | 2 | 2 | 2 |
X | 8 | 18 | 3 | 1 | - |
XI | 8 | 52 | 3 | 3 | 3 |
XII | 6 | 64 | 1 | 0 | - |
Total | 80 | 467 | 31 | 23 | 16 |