Table 1 Variables contained in the final master table of the digital image analysis
From computefeature | From preprocessing, processing, and clustering | ||
|---|---|---|---|
Variable name | Description | Variable name | Description |
s.area | Area size | Meandiameterµm | Diameter average calculated in µm |
s.perimeter | Perimeter | Diameter_log | log10 of diameter |
s.radius.mean | Mean radius | Q1 | First quantile |
s.radius.sd | Standard deviation of the mean radius | Q3 | Third quantile |
s.radius.max | Max radius | IQR | Interquartile range |
s.radius.min | Min radius | nmbpeak | Number of peaks |
m.cx | Center of mass x | nmdeep | Number of valleys |
m.cy | Center of mass y | Cluster_drei | Classification of three clusters |
m.majoraxis | Elliptical fit major axis | Cluster_zw | Classification of two clusters |
m.eccentricity | Elliptical eccentricity | Imagetotalpix | Total image pixels |
m.theta | Object angle | Innerpixarea | Total pixel ROI |
order | Original order of cell sequence | Cellwallcount | Total pixel of cell wall |
Intercellcount | Total pixel of cell spaces | ||
Dataname | Image name | ||