Table1 NGS data summary of CB-RNA-seq and mRNA-seq
From: A simple and robust method for isolating and analyzing chromatin-bound RNAs in Arabidopsis
Sample name | Raw read pairs | Raw read length (bp) | Clean read number | Clean read length (bp) | Mapping read | Uniq-mapping read |
|---|---|---|---|---|---|---|
mRNA-Rep1 | 41,856,806 | 12,557,041,800 | 72,350,924 | 10,457,056,137 | 71,225,984 | 67,162,647 |
mRNA-Rep2 | 47,478,548 | 14,243,564,400 | 83,689,834 | 12,100,412,269 | 82,363,749 | 80,335,880 |
mRNA-Rep3 | 38,940,987 | 11,682,296,100 | 67,636,210 | 9,773,482,296 | 66,554,070 | 65,202,996 |
CB-RNA-Rep1 | 16,969,580 | 5,090,874,000 | 17,757,542 | 2,628,581,958 | 17,275,196 | 16,534,432 |
CB-RNA-Rep2 | 20,996,926 | 6,299,077,800 | 20,555,956 | 3,043,500,976 | 19,909,023 | 19,109,633 |
RNAe-Rep1 | 6,852,120 | 2,055,636,000 | 9,807,400 | 1,456,490,416 | 8,927,603 | 8,211,434 |
RNAe -Rep2 | 9,497,294 | 2,849,188,200 | 13,625,772 | 2,024,733,454 | 12,487,382 | 11,427,750 |
RNAe + f-Rep1 | 5,779,715 | 1,733,914,500 | 7,926,760 | 1,175,219,966 | 7,208,602 | 6,486,167 |
RNAe + f-Rep2 | 7,359,120 | 2,207,736,000 | 8,896,990 | 1,319,957,238 | 8,110,068 | 7,243,658 |
RNAf-Rep1 | 30,374,722 | 9,112,416,600 | 48,166,706 | 7,148,469,139 | 47,623,079 | 43,707,190 |
RNAf-Rep2 | 27,261,183 | 8,178,354,900 | 44,274,638 | 6,571,437,414 | 43,750,796 | 41,734,703 |