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Fig. 6 | Plant Methods

Fig. 6

From: High-throughput estimation of allele frequencies using combined pooled-population sequencing and haplotype-based data processing

Fig. 6

Genome-wide allele frequency on a genetic map for MH. The average donor allele frequency across all replicates (P1-P3) is plotted in % (y-axis) against the genomic position (x-axis), split by chromosome and illustrated in cM. Each dot represents an MH, and the color is related to the read coverage. The orange line indicates the expected allele frequency in the BC2F3. A MACE RNA sequencing output, B WGrsS, C GBS. Values are the average across all replicates

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