Table 2 Genetic intervals of digenic interaction for BRTs detected in H3 and Z3
BRTs | Â | Chr. | Marker interval | Chr. | Marker interval | LOD | ai | aj | aaij | R2(%) |
|---|---|---|---|---|---|---|---|---|---|---|
LL | H3 | 3 | npi425a-npi420 | 4 | umc2139-umc52 | 5.3 | − 1.6 | − 0.3 | − 6.9 | 10.1 |
|  |  | 2 | umc2030-umc1259 | 4 | psr144b-umc1943 | 5.2 | − 2.0 | − 1.7 | − 7.0 | 9.6 |
|  |  | 4 | agrr301-bnlg490 | 5 | S5_212169465-InDel90 | 5.5 | − 2.9 | 1.6 | − 7.0 | 9.6 |
|  |  | 4 | phi295450-InDel63 | 8 | umc1913-csu329 | 5.9 | − 2.3 | − 0.4 | 7.3 | 13.2 |
|  |  | 4 | InDel78-S4_240467004 | 9 | mmp131-asg44 | 5.3 | − 1.8 | − 0.7 | 6.5 | 9.7 |
|  | Z3 | 8 | mmp166-npi585a | 9 | umc1691-umc1271 | 5.2 | 2.8 | 5.8 | − 12.6 | 10.1 |
|  |  | 9 | umc1570-lim99b | 9 | isu111b-csu471 | 5.3 | 6.7 | − 1.1 | 13.1 | 9.4 |
LW | H3 | 2 | umc2030-umc1259 | 2 | npi287a-umc44b | 5.8 | 0.1 | 0.1 | 0.7 | 9.8 |
|  |  | 5 | mmp169-php20566 | 5 | S5_1531780-PAV58 | 5.0 | 0.0 | 0.0 | − 0.6 | 8.4 |
| Â | Â | 3 | npi420-InDel62 | 10 | asg19b-csu48 | 5.2 | 0.2 | 0.0 | 0.8 | 14.0 |
|  | Z3 | 3 | mmc0022-InDel58 | 3 | npi420-InDel62 | 6.0 | 1.1 | − 0.7 | 1.8 | 19.7 |
LA | H3 | 1 | umc1177-tub1 | 6 | rz143a-umc85a | 5.2 | 0.3 | 0.3 | − 1.1 | 17.3 |
|  | Z3 | 5 | S5_1531780-PAV58 | 8 | umc1316-bnl12.30a | 5.1 | 1.0 | 0.7 | − 2.2 | 18.3 |
SDW | H3 | 1 | lim122-cdo1387b | 6 | umc85a-isu085a | 5.1 | 0.0 | 0.0 | − 0.2 | 18.6 |
|  | Z3 | 1 | asg30b-umc1169 | 8 | cdo460-mmp57 | 5.5 | − 0.1 | 0.1 | 0.4 | 9.4 |
|  |  | 4 | PAV42-PAV5 | 9 | PAV93-PAV30 | 6.3 | 0.4 | 0.4 | − 0.6 | 23.6 |