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Table 1 Comparative table of common genotype methods

From: K-seq, an affordable, reliable, and open Klenow NGS-based genotyping technology

  Cost RNA handling Patented Targeted Predesign platform
WGS High No No Yes No
RNAseq High Yes No No No
Exome sequecing High No No No Yes
Amplicon sequecing High No No Yes Yes
GBS Low No Yes No No
DArTseq Low No Yes No No
rAmpSeq Low No No No No
K-Seq Low No No No No
SNP microarrays Low No Yes Yes Yes
KASP Low No Yes Yes Yes
SPET Low No Yes Yes Yes
Seq-SNP Low No Yes Yes Yes
Ion AmpliSeq technology Low No Yes Yes Yes