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Table 2 Number of called peaks and FRiP value under the same sequencing depth as indicated

From: Efficient chromatin profiling of H3K4me3 modification in cotton using CUT&Tag

Sample 6 M 8 M 10 M 12 M 14 M 16 M 24 M
CUT&Tag_H3K4me3_rep1 42,367 (0.70) 45,417 (0.72) 47,189 (0.74)
CUT&Tag_H3K4me3_rep2 46,779 (0.66) 49,775 (0.68) 53,140 (0.70) 55,667 (0.71) 56,331 (0.72)
CUT&Tag_IgG 1,082 (0.44) 1,119 (0.44) 1,135 (0.44) 1,159 (0.44) 1,187 (0.44)
ChIP_H3K4me3 18,024 (0.11) 23,411 (0.13) 27,491 (0.15) 30,898 (0.16) 33,543 (0.17) 35,495 (0.18) 40,859 (0.20)
ChIP_mock 602 (0.01) 843 (0.01) 1,029 (0.01) 1,317 (0.01) 1,682 (0.01)
  1. Data were generated by random sampling of clean reads from the NGS fastq files. FRiP (Fraction of reads in peaks) [15] values which act as an indicator of a signal-to-noise ratio were provided within the brackets.