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Fig. 5 | Plant Methods

Fig. 5

From: Efficient chromatin profiling of H3K4me3 modification in cotton using CUT&Tag

Fig. 5

Analysis of H3K4me3 signals near the protein coding genes in CUT&Tag and ChIP. a Heatmap of CUT&Tag and ChIP signals upstream and downstream of the gene body. Scale regions were 5,000 bp upstream of the translation starting site (TSS), 5,000 bp downstream of the translation end site (TES), and a 5,000-bp region on the gene body. Length was plotted using computeMatrix and plotHeatmap tools in deepTools. b, c The dot plots showed the correlation analysis of peaks near the genes. Signals of the peaks were normalized by the log2 value of count per million mapped reads (CPM)

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