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Table 1 Target table of Brassica napus dataset in R

From: DiCoExpress: a tool to process multifactorial RNAseq experiments from quality controls to co-expression analysis through differential analysis based on contrasts inside GLM models

SampleTissueTreatmentReplicate
MatureLeaf_NoSi_R1MatureLeafNoSiR1
MatureLeaf_NoSi_R2MatureLeafNoSiR2
MatureLeaf_NoSi_R3MatureLeafNoSiR3
MatureLeaf_Si_R1MatureLeafSiR1
MatureLeaf_Si_R2MatureLeafSiR2
MatureLeaf_Si_R3MatureLeafSiR3
Root_NoSi_R1RootNoSiR1
Root_NoSi_R2RootNoSiR2
Root_NoSi_R3RootNoSiR3
Root_Si_R1RootSiR1
Root_Si_R2RootSiR2
Root_Si_R3RootSiR3
  1. The target table provides the experimental design. Each row describes a sample by specifying the level for each factor in the columns
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Plant Methods

ISSN: 1746-4811