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Table 4 ΔRn values obtained for in four known loquat strains using 17 pairs of SSR primers

From: Molecular karyotypes of loquat (Eriobotrya japonica) aneuploids can be detected by using SSR markers combined with quantitative PCR irrespective of heterozygosity

SSR name

LG in loquat

‘Ruantiaobaisha’

‘Wuheguoyu’

H424

Mean control

H39

TsuENH094

LG1

0.96 ± 0.02

0.97 ± 0.01

0.94 ± 0.02

0.96 ± 0.02

0.96 ± 0.02

MEST028

LG2

0.96 ± 0.06

0.95 ± 0.05

0.94 ± 0.03

0.95 ± 0.01

0.98 ± 0.05

CH03g12

LG3

0.98 ± 0.04

0.91 ± 0.03

0.97 ± 0.05

0.95 ± 0.04

1.42* ± 0.03

TsuENH044

LG4

0.99 ± 0.01

0.95 ± 0.20

1.01 ± 0.04

0.98 ± 0.03

1.08 ± 0.15

NZmsCN898349

LG5

1.03 ± 0.03

1.01 ± 0.04

1.00 ± 0.02

1.01 ± 0.02

1.01 ± 0.03

NZmsCO754252

LG6

1.00 ± 0.03

1.00 ± 0.03

1.00 ± 0.01

1.00 ± 0.00

1.00 ± 0.01

NZmsEB137749

LG7

1.04 ± 0.00

0.98 ± 0.09

1.01 ± 0.02

1.01 ± 0.03

0.99 ± 0.01

TsuENH034

LG8

0.98 ± 0.01

0.99 ± 0.01

0.98 ± 0.01

0.98 ± 0.01

1.35* ± 0.07

TsuENH097

LG9

1.02 ± 0.02

1.02 ± 0.01

1.00 ± 0.01

1.01 ± 0.01

0.96 ± 0.00

Hi05b02

LG10

1.00 ± 0.04

1.01 ± 0.05

0.99 ± 0.03

1.00 ± 0.01

1.31* ± 0.06

IPPN14

LG11

1.04 ± 0.03

1.04 ± 0.03

1.02 ± 0.01

1.03 ± 0.01

0.95 ± 0.02

MEST011

LG12

1.04 ± 0.05

1.08 ± 0.05

0.98 ± 0.04

1.03 ± 0.05

0.93 ± 0.10

CH02e02

LG13

1.03 ± 0.04

0.99 ± 0.02

0.99 ± 0.05

1.00 ± 0.02

0.94 ± 0.04

TsuENH093

LG14

1.04 ± 0.02

1.03 ± 0.01

1.02 ± 0.02

1.03 ± 0.01

1.00 ± 0.02

TsuENH007

LG15

1.07 ± 0.00

0.98 ± 0.04

0.98 ± 0.01

1.01 ± 0.05

0.97 ± 0.02

Hi22f06

LG16

1.11 ± 0.02

1.07 ± 0.02

0.95 ± 0.07

1.04 ± 0.08

1.51* ± 0.03

TsuENH002

LG17

1.11 ± 0.12

1.08 ± 0.09

0.99 ± 0.08

1.06 ± 0.06

1.50* ± 0.03

  1. The SSR-qPCR results are expressed as the means ± standard deviations, * indicates LGs with abnormalities in the chromosome dosage