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Table 2 SSR markers used for cross-genus amplification in loquat

From: Molecular karyotypes of loquat (Eriobotrya japonica) aneuploids can be detected by using SSR markers combined with quantitative PCR irrespective of heterozygosity

SSR name

Origin

Reference

ssrEJ014, ssrEJ086, ssrEJ088, ssrEJ042, ssrEJ282, ssrEJ049, ssrEJ324, ssrEJ061, ssrEJ104, ssrEJ329b, ssrEJ037, ssrEJ066, ssrEJ056, ssrEJ046, ssrEJ012, ssrEJ271

Loquat

[35]

NB105a, NB103a, NB106a, NB101a, NB114a, NH033b, NH011b, NH026a, NH007b, NH024b, KA16

Pear

[36,37,38]

IPPN14, IPPN09

Pear

[39]

TsuENH094, TsuENH003, TsuENH184, TsuENH119, TsuENH174, TsuENH207, TsuENH229, TsuENH017, TsuENH074, TsuENH044, TsuENH069, TsuENH086, TsuENH067, TsuENH034, TsuENH005, TsuENH097, TsuENH009, TsuENH004, TsuENH093, TsuENH096, TsuENH031, TsuENH032, TsuENH007, TsuENH022, TsuENH042, TsuENH002, TsuENH028, TsuENH033, TsuENH080

Pear

[30]

CH05g08, CH02f06, CH03d10, CH04e12b, CH02b10, CH03d01, CH02c06, CH03b01, CH03g12, CH03g07, CH04g07, CH01d03, CH01d09, CH02h11a, CH01b12, CH03a09, CH04f04, CH04e03, CH02b12, CH04g09, CH03d07, CH03d12, CH04e05, CH05c02, CH01f09, CH01h10, CH05a02, CH05c07, CH01h02, CH05a03, CH01f03b, CH04c06, CH04f03, CH01f07a, CH02b03b, CH05h12, CH02d12, CH04a12, CH04d07, CH04h02, CH04d02, CH01f02, CH04g04, CH05d04, CH05g07, CH03c02, CH02e02, CH02g01, CH03a08, CH03h03, CH05h05, CH04f06, CH05g11, CH04c07, CH01d08, CH02e12, CH01a09, CH01e01, CH03g06, CH05d03, CH02c09, CH03h06, CH05g05, CH01f03a, CH05c06, CH02a03, CH05e04, CH02d10a, CH05a09, CH04b10, CH04f10, CH05a04, CH04c10, CH05g03, CH01h01, CH01c08, CH04g12, CH02h11b, CH05d11, MS14h03, MS06c09, MS06g03, MS14b04

Apple

[40]

AJ320188SSR, AT000400SSR, AT000174SSR, AU223657SSR, AU223548SSR, AY187627SSR, CN581493SSR, CN493139SSR, CN444542SSR, Hi02c07, Hi03e04, Hi07e08, Hi15h12, Hi04g11, Hi08a04, Hi03a03, Hi04a05, Hi05b02, Hi08h12, Hi04g05, Hi15a13, Hi22f06, Hi04e04, Hi07h02, Hi23d11b, U78949SSR, Z71980SSR

Apple

[41]

NZ04f3, NZ02b1

Apple

[42]

NZmsCN879773, NZmsEB149808, NZmsEB177464, NZmsEB155242, NZmsEB134379, NZmsCN898349, NZmsCO754252, NZmsCN943067, NZmsEB137749, NZmsDR033893, NZmsEB111793, NZmsCN878021, NZmsEE663955

Apple

[43]

MEST012, MEST028, MEST067, MEST089, MEST095, MEST034, MEST063, MEST023, MEST038, MEST043, MEST011, MEST003, MEST041, MEST029, MEST069, MEST096, MEST091

Apple

[44]

GD142

Apple

[45]

CH-Vf1

Apple

[46]

M06a

Peach

[47]

BPPCT030, BPPCT008, BPPCT014, BPPCT006

Peach

[48]

ssrPaCITA16

Apricot

[49]

CPSCT026

Plum

[50]

  1. The stably amplified SSR markers are shown in bold and the SSR markers with polymorphisms are underlined
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Plant Methods

ISSN: 1746-4811