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Table 4 Examples of rearrangements in the Yugu1 genome identified by long single ends

From: High-throughput long paired-end sequencing of a Fosmid library by PacBio

Support read number

(non-duplicate)

Support read number

(duplicate)

SV type

SV length (bp)

Coordinate (bp)

15

45

Inversion

8091

Chr: NC_028458.1

49998519–50006610

12

17

Deletion

1596

Chr: NC_028451.1

33653189–33654785

9

47

Duplication

1883

NW_014576740.1

62365–64247

7

37

Deletion

359

Chr: NC_028450.1

25710225–25710584

7

11

Duplication

2400

Chr: NC_028455.1

4360170–4362570

  1. SV: structural arrangement; Coordinate: the location of SVs; NC_: chromosome; NW: scaffold