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Table 3 Examples of rearrangements in the Yugu1 genomeidentified by long paired ends

From: High-throughput long paired-end sequencing of a Fosmid library by PacBio

Support read number
(non-duplicate)
Support read number
(duplicate)
SV typeSV length (bp)Coordinate (bp)
1281Deletion58,435Chr: NC_028457.1
39834375–39892810
1132Duplication33,248Chr: NC_028455.1
29621517–29654765
1047Duplication49,573Chr: NC_028452.1
16482798–16532371
1043TranslocationNonNC_028452.1
28454982
NC_028451.1
596035
959TranslocationNonNC_028453.1
23754472
NC_028452.1
6538935
  1. SV: structural arrangement; Coordinate: the location of SVs; NC_: chromosome; NW: scaffold