Fig. 4
From: High-throughput long paired-end sequencing of a Fosmid library by PacBio
Genome alignments between scaffolds and reference. A is the comparison results of the assembly from the simulated sequencing depth of 30 × and the Y1 Fosmid long paired ends covering tenfold of the S. cerevisiae S288C physical genome with reference. B is the comparison results of the assembly from the simulated sequencing depth of 30 × and the Y2 Fosmid long paired-ends covering fivefold of the S. cerevisiae S288C physical genome with reference. The plot shows the best (1-to-1) alignments between the reference (x-axis) and each assembly (y-axis). Red lines indicate forward-strand matches while blue lines indicate reverse-complement matches. Dashed vertical lines delineate chromosome ends while dashed horizontal lines delineate contigs. A diagonal indicates concordant matches while off-diagonal matches indicate assembly errors or differences versus the reference