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Table 4 Candidate genes for water use efficiency (WUE) identified through SEM-GWAS

From: Utilizing trait networks and structural equation models as tools to interpret multi-trait genome-wide association studies

Gene ID

Chr

BP

SNP

Rice Annotation

Putative Function

Reference

LOC_Os01g11150

1

5,968,819

SNP-1.5964363.

GA2OX7

GA catabolism

[47]

LOC_Os01g11054

1

5,899,555

SNP-1.5964363.

OsPPC4

Growth, NH\(_4^+\) assimilation

[65]

LOC_Os06g43660

6

26,272,897

SNP-6.26293126.

OVP1

Plant growth

[49]

  1. Chr: chromosome; BP: gene position in base pairs; GA: gibberellic acid
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Plant Methods

ISSN: 1746-4811