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Table 1 List of RNA-seq samples and the percentage and number of mapped reads to different reference transcriptomes

From: A phenol/chloroform-free method to extract nucleic acids from recalcitrant, woody tropical species for gene expression and sequencing

Species

Number of reads

Number of mapped reads

% of reads mapped

NCBI Project No.

Contigs intranscriptome or genome

References

Avocado

160,082,107

122,046,598

76.24

PRJNA282441

83,650

Ibarra-Laclette et al. [31]

Avocado

160,082,107

128,289,801

80.14

PRJNA391003

151,545

Liu et al. [32]

Mango

197,535,231

122,456,877

65.85

PRJNA227243

57,544

Luria et al. [33]

Mango

197,535,231

136,367,200

69.03

PRJNA234455

54,207

Wu et al. [34]

Macadamia

159,049,565

126,873,838

79.77

PRJEB13765

23,452

Nock et al. [35]