Table 3 Number of genes in the carbohydrate metabolic pathway up-regulated in the rhizome compared with leaf and root
Carbohydrate metabolism pathway | Pathway ID | Number of up-regulated genes | |
|---|---|---|---|
Rhizome versus leaf | Rhizome versus root | ||
Amino sugar and nucleotide sugar metabolism | ko00520 | 106 (34.42%) | 63 (27.27%) |
Starch and sucrose metabolism | ko00500 | 123 (33.88%) | 73 (39.67%) |
Glycolysis/Gluconeogenesis | ko00010 | 70 (27.89%) | 41 (26.28%) |
Pentose and glucuronate interconversions | ko00040 | 96 (46.60%) | 54 (34.39%) |
Pyruvate metabolism | ko00620 | 50 (26.61%) | 32 (25.00%) |
Glyoxylate and dicarboxylate metabolism | ko00630 | 50 (27.03%) | 29 (21.28%) |
Galactose metabolism | ko00052 | 62 (32.12%) | 46 (31.94%) |
Citrate cycle (TCA cycle) | ko00020 | 36 (25.17%) | 21 (21.00%) |
Ascorbate and aldarate metabolism | ko00053 | 57 (38.26%) | 29 (27.36%) |
Inositol phosphate metabolism | ko00562 | 27 (23.68%) | 12 (16.90%) |
Pentose phosphate pathway | ko00030 | 39 (32.50%) | 21 (33.33%) |
Fructose and mannose metabolism | ko00051 | 32 (27.35%) | 29 (35.80%) |
Propanoate metabolism | ko00640 | 11 (12.50%) | 14 (21.88%) |
Butanoate metabolism | ko00650 | 9 (19.57%) | 5 (15.63%) |
C5-Branched dibasic acid metabolism | ko00660 | 4 (25.00%) | 6 (42.86%) |