Skip to main content

Table 3 Top 10 OrthoClust results sorted by the total number of genes from a module

From: Comparing time series transcriptome data between plants using a network module finding algorithm

No.

Module ID

Total number of genes from a module

The number of genes from soybean

The number of genes from Arabidopsis

1

2

352

273 (77.6%)

79 (22.4%)

2

8

331

255 (77.0%)

76 (23.0%)

3

39

297

174 (58.6%)

123 (41.4%)

4

1

253

214 (84.6%)

39 (15.4%)

5

3

245

207 (84.5%)

38 (15.5%)

6

187

215

56 (26.0%)

159 (74.0%)

7

224

212

53 (25.0%)

159 (75.0%)

8

57

192

110 (57.3%)

82 (42.7%)

9

113

147

38 (25.9%)

109 (74.1%)

10

19

45

39 (86.7%)

6 (13.3%)

  1. OrthoClust was performed with parameters κ = 3, gene co-expression correlation cutoff ≥ 0.99 and homologous pairs obtained from RBH Blast