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TableĀ 2 Examples of input data files for OrthoClust analysis

From: Comparing time series transcriptome data between plants using a network module finding algorithm

(A)

(B)

(C)

Row

Column

Row

Column

Soybean gene

Arabidopsis gene

Glyma.01G006400

Glyma.01G016500

AT1G01540

AT1G05350

Glyma.01G001300

AT2G07050

Glyma.01G021300

Glyma.01G021400

AT1G06040

AT1G06150

Glyma.01G005800

AT4G29310

Glyma.01G019400

Glyma.01G022500

AT1G01720

AT1G07400

Glyma.01G006100

AT4G26300

Glyma.01G015400

Glyma.01G026700

AT1G05230

AT1G07570

Glyma.01G010100

AT1G32090

Glyma.01G025100

Glyma.01G026700

AT1G02660

AT1G08230

Glyma.01G015400

AT2G35470

Glyma.01G025100

Glyma.01G028900

AT1G01090

AT1G08510

Glyma.01G019400

AT5G65670

  1. There are three inputs: two co-expression networks of (A) soybean and (B) Arabidopsis, (C) orthologous pairs between soybean and Arabidopsis.