Table 2 List of 20 gymnosperm plastomes from GenBank used to test the performance of PGA
From: PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes
Species | Family | Size (bp) | Accession no. |
|---|---|---|---|
Amentotaxus formosana | Taxaceae | 136,430 | NC_024945 |
Araucaria heterophylla | Araucariaceae | 146,723 | NC_026450 |
Callitris rhomboidea | Cupressaceae | 121,117 | NC_034940 |
Cephalotaxus wilsoniana | Cephalotaxaceae | 136,196 | NC_016063 |
Cryptomeria japonica | Cupressaceae | 131,810 | NC_010548 |
Cunninghamia lanceolata | Cupressaceae | 135,334 | NC_021437 |
Cycas taitungensis | Cycadaceae | 163,403 | NC_009618 |
Dacrycarpus imbricatus | Podocarpaceae | 133,811 | NC_034942 |
Dioon spinulosum | Zamiaceae | 161,815 | NC_027512 |
Ginkgo biloba | Ginkgoaceae | 156,988 | NC_016986 |
Juniperus communis | Cupressaceae | 128,334 | NC_035068 |
Metasequoia glyptostroboides | Cupressaceae | 131,887 | NC_027423 |
Podocarpus totara | Podocarpaceae | 133,259 | NC_020361 |
Retrophyllum piresii | Podocarpaceae | 133,291 | NC_024827 |
Sciadopitys verticillata | Sciadopityaceae | 138,284 | NC_029734 |
Sequoia sempervirens | Cupressaceae | 133,929 | NC_030372 |
Taiwania flousiana | Cupressaceae | 131,413 | NC_021441 |
Taxodium distichum | Cupressaceae | 131,954 | NC_034941 |
Torreya grandis | Taxaceae | 136,949 | NC_034806 |
Wollemia nobilis | Araucariaceae | 145,630 | NC_027235 |