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Table 4 A subset of associated loci and candidate genes numbers according to GWAS analysis for PC and NDSI

From: Using hyperspectral analysis as a potential high throughput phenotyping tool in GWAS for protein content of rice quality

Trait Chr. SNP# SNP positiona P_value Gene#
NDSI 1 3 7837287 2.75E−10 65
  1   10727694b 2.40E−10  
  2   21222443b 4.72E−19  
PC 1 2 10727694b 8.53E−12 43
  2   21222443b 6.09E−34  
  1. aPosition in bp; Chr. Chromosome
  2. bHyperspectral index NDSI could locate the exact SNP positions as PC