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Table 4 A subset of associated loci and candidate genes numbers according to GWAS analysis for PC and NDSI

From: Using hyperspectral analysis as a potential high throughput phenotyping tool in GWAS for protein content of rice quality

Trait

Chr.

SNP#

SNP positiona

P_value

Gene#

NDSI

1

3

7837287

2.75E−10

65

 

1

 

10727694b

2.40E−10

 
 

2

 

21222443b

4.72E−19

 

PC

1

2

10727694b

8.53E−12

43

 

2

 

21222443b

6.09E−34

 
  1. aPosition in bp; Chr. Chromosome
  2. bHyperspectral index NDSI could locate the exact SNP positions as PC