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Table 3 Transcription factors differentially expressed in the epidermis in the developing embryo.

From: Combining laser-assisted microdissection (LAM) and RNA-seq allows to perform a comprehensive transcriptomic analysis of epidermal cells of Arabidopsis embryo

AGI

Name

LogDiff Epidermis/mesophyll

Expressed in the embryo

Localisation

References

At5g17800

AtMYB56

myb domain protein 56

> 10

Yes

  

AT3G15510

ATNAC2

NAC domain containing protein 2

9.70

Yes

  

AT5G45980

WOX8

WUSCHEL-related homeobox 8

9.09

Yes

  

AT4g31680

 

Transcriptional factor B3 family protein

6.5

Yes

  

AT2G20825

ULT2

ULTRAPETALA 2

5.23

   

AT1G49770

 

bHLH

5.08

   

AT3G27785

MYB118

myb domain protein 118

5.03

Yes

  

AT2G38470

#N/A

 

4.97

 

Epidermis

Suh et al. [39]

AT1G27730

STZ

SALT TOLERANCE ZINC FINGER

4.71

   

AT4G25490

CBF1

C-REPEAT/DRE BINDING FACTOR 1

4.58

Yes

  

AT5G62470

MYB96

myb domain protein 96

4.43

Yes

  

AT3G61250

AtMYB17

myb domain protein 17

4.23

Yes

  

AT5G47230

ERF5

ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5

4.15

   

AT5G59820

RHL41

RESPONSIVE TO HIGH LIGHT 41

3.95

   

AT1G65620

AS2

ASYMMETRIC LEAVES 2

3.83

Yes

  

AT5G18270

ANAC087

 

3.81

Yes

  

AT3G47600

MYB94

myb domain protein 94

3.71

Yes

  

AT5G46880

HB-7

homeobox-7

3.65

Yes

Epidermis

Nakamura et al. [25]

AT2G27050

EIL1

ETHYLENE-INSENSITIVE3-LIKE 1

3.54

Yes

  

AT5G49330

AtMYB111

myb domain protein 111

3.23

   

AT2G36890

ATMYB38

myb domain protein 38

3.11

Yes

  

AT4G38620

MYB4

myb domain protein 4

3.06

Yes

  

AT4G04890

PDF2

PROTODERMAL FACTOR2

3.03

Yes

Epidermis

Abe et al. [1]

AT4G21750

ATML1

MERISTEM LAYER 1

2.86

Yes

Epidermis

Sessions et al. [34]

AT5G14750

WER

WEREWOLF 1

2.78

Yes

Epidermis

Ryu et al. [31]

AT1G32640

ATMYC2

JASMONATE INSENSITIVE 1

2.67

   

AT3G62610

AtMYB11

myb domain protein 11

2.64

Yes

 

Stracke et al. 2007

AT1G63650

EGL3

ENHANCER OF GLABRA3

2.51

Yes

Epidermis

Bernhardt et al. [6]

AT3G52910

AtGRF4

GROWTH-REGULATING FACTOR 4

2.37

Yes

  

AT4G01250

WRKY22

WRKY DNA-binding protein 22

2.34

Yes

  

AT1G21970

LEC1

LEAFY COTYLEDON 1

2.31

Yes

Epidermis

Lotan et al. [22]

AT4G16780

ATHB-2

Homeobox-leucine zipper protein HAT4

2.29

   

AT4G25470

CBF2

FREEZING TOLERANCE QTL 4

2.18

   

AT1G14687

ATHB32

 

2.14

Yes

  

AT3G16770

ATEBP/RAP2.3

 

2.09

Yes

  

AT2G45190

AFO

ABNORMAL FLORAL ORGANS

1.99

Yes

  

AT4G24240

WRKY7

 

1.88

Yes

  

AT4G31550

WRKY11

 

1.51

Yes

  

AT1G14440

ATHB31

 

1.46

Yes

  

AT3G01460

#N/A

 

1.40

Yes

  

AT4G36930

SPT

SPATULA

1.18

Yes

  

AT2G34710

PHB

PHABULOSA

1.17

Yes

  

AT3G26790

FUS3

FUSCA 3

1.08

Yes

Epidermis

Tsuchiya et al. [42]

AT3G62670

ARR20

ARABIDOPSIS RESPONSE REGULATOR

0.86

Yes