A cautionary note on the use of chromosome conformation capture in plants

Table 2 3C primers for FspBI restriction profile

Name	Gene locus and restriction enzyme	Primer on	Seq 5′ to 3′
PDS6848	SOC1_FspBI	Fragment I	AGATTCTCAAACATCAGTCGGA
PDS6849	SOC1_FspBI	Fragment II	ACAAAAGGAGTAGGTTTCTGGA
PDS6850	SOC1_FspBI	Fragment III	TGAGCTTATGACTGGTAAACTC
PDS6851	SOC1_FspBI	Fragment IV	GTTTTGGATTTGTCTCAACCAG
PDS7489	SOC1_FspBI	Fragment V	TGGTCCTCCTCCCGATATAGA
PDS6852	SOC1_FspBI	Fragment VI	ACGAGAGAGTGTTTGTGTCC
PDS6847	SOC1_FspBI	Fragment VII (Bait)	GACGTTTGCTTTGAGAGGTG
PDS6853	SOC1_FspBI	Fragment VIII	GCTTCATTTCATGCTCATTCC
PDS6854	SOC1_FspBI	Fragment IX	ACTTCTTTCTCTCGAACCTACT
PDS6855	SOC1_FspBI	Fragment X	AGTAAGTAAGCCTCTTGTGCT
PDS6856	SOC1_FspBI	Fragment XI	AGCTGCTTCTCTCTTGTTGT
PDS6857	SOC1_FspBI	Fragment XII	AAGGGCCTACTTTGCGATAA
PDS7307	TIP41_Like FspBI	Bait-TSS	GTTTCGATCTCCCAGTCATG
PDS7308	TIP41_Like FspBI	− 500 bp	AACTAAACCAAAGCAAATACGA

ISSN: 1746-4811