Table 3 Comparison of default fields in the Study file in Basic, Field and Greenhouse ISA-Tab configurations
From: Measures for interoperability of phenotypic data: minimum information requirements and formatting
Basic | Field | Greenhouse |
|---|---|---|
Source Name | Source Name | Source Name |
Characteristics[Organism] | Characteristics[Organism] | Characteristics[Organism] |
Characteristics[Infraspecific name] | Characteristics[Infraspecific name] | Characteristics[Infraspecific name] |
Characteristics[Seed origin] | Characteristics[Seed origin] | Characteristics[Seed origin] |
Characteristics[Study start] | Characteristics[Study start] | Characteristics[Study start] |
Characteristics[Study duration] | Characteristics[Study duration] | Characteristics[Study duration] |
Characteristics[Growth facility] | Characteristics[Growth facility] | Characteristics[Growth facility] |
Characteristics[Geographic location] | Characteristics[Geographic location] | Characteristics[Geographic location] |
Protocol REF[Rooting] | Protocol REF[Rooting] | |
Parameter Value[Rooting medium] | Parameter Value[Rooting medium] | |
Parameter Value[Container type] | ||
Parameter Value[Container volume] | ||
Parameter Value[Plot size] | Parameter Value[Container dimension] | |
Unit | Unit | |
Parameter Value[Sowing density] | Parameter Value[Number of plants per container] | |
Parameter Value[pH] | Parameter Value[pH] | |
Protocol REF[Aerial conditions] | Protocol REF[Aerial conditions] | |
Parameter Value[Air humidity] | Parameter Value[Air humidity] | |
Parameter Value[Daily photon flux] | Parameter Value[Daily photon flux] | |
Parameter Value[Length of light period] | Parameter Value[Length of light period] | |
Parameter Value[Day temperature] | Parameter Value[Day temperature] | |
Parameter Value[Night temperature] | Parameter Value[Night temperature] | |
Protocol REF[Nutrition] | Protocol REF[Nutrition] | |
Parameter Value[N before fertilisation] | Parameter Value[N before fertilisation] | |
Parameter Value[Type of fertiliser] | Parameter Value[Type of fertiliser] | |
Parameter Value[Amount of fertiliser] | Parameter Value[Amount of fertiliser] | |
Protocol REF[Watering] | Protocol REF[Watering] | |
Parameter Value[Irrigation type] | Parameter Value[Irrigation type] | |
Parameter Value[Volume] | Parameter Value[Volume] | |
Parameter Value[Frequency] | Parameter Value[Frequency] | |
Protocol REF[Sampling] | Protocol REF[Sampling] | |
Parameter Value[Experimental unit] | Parameter Value[Experimental unit] | |
Sample Name | Sample Name | Sample Name |