Table 1 Assembly statistics of seven single bread wheat BACs and simulated BAC pool assemblies
From: An efficient approach to BAC based assembly of complex genomes
BAC samples | Pre-processing statistics | Assembly statistics | |||||||
|---|---|---|---|---|---|---|---|---|---|
Name | Coverage xa | Vector % | E.coli % | Clonal % | Coverage xb | Contigs | N50 Kb | Longest Kb | Length Kb |
A | 811 | 4 | 13 | 0.6 | 643 | 4 | 99 | 99 | 113 |
B | 1041 | 5 | 10 | 0.8 | 844 | 1 | 118 | 118 | 118 |
C | 709 | 5 | 10 | 0.6 | 572 | 7 | 23 | 50 | 115 |
E | 833 | 4 | 14 | 0.5 | 656 | 4 | 81 | 81 | 128 |
F | 748 | 4 | 11 | 0.6 | 599 | 5 | 32 | 46 | 111 |
G | 943 | 5 | 10 | 0.8 | 773 | 1 | 102 | 102 | 102 |
H | 829 | 4 | 28 | 0.4 | 519 | 4 | 90 | 90 | 113 |
ABCE | 849 | 4 | 12 | 0.6 | 679 | 23 | 43 | 97 | 452 |
BCEF | 833 | 5 | 11 | 0.6 | 668 | 21 | 43 | 97 | 443 |
CEFG | 808 | 4 | 11 | 0.6 | 650 | 22 | 32 | 81 | 433 |
EFGH | 838 | 4 | 16 | 0.6 | 637 | 20 | 46 | 81 | 430 |