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Table 3 Summary of circadian period QTL detected in Jea x Col-0 RIL population

From: TRiP: Tracking Rhythms in Plants, an automated leaf movement analysis program for circadian period estimation

QTL

CHR

LOD

INT/POS 1

ADD 2

VAR 3

Candidate Genes

Jea

2

2.33

13.80-33.50 (24)

0.43

7.11

ELF3, CCR2, XCT, FIO1, LIP1, PHYB, LKP2

Jea

4

3.01

51.80-60.40 (59)

0.51

5.61

PRMT5, bHLH69

Jea

5

4.68

0.00-4.50 (0)

0.56

9.34

PRR7, RVE1

  1. 1INT/POS: 1-LOD QTL interval with peak position, cM.
  2. 2ADD: Additive effects of the QTL, hours.
  3. 3VAR: Percent of the variation explained.
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Plant Methods

ISSN: 1746-4811