Table 1 Summary of genomic information on six species used for CSGM designer platform
Species name | Common name | Genome size (Mbp) | Chromosome No | Release version | Number of transcript |
|---|---|---|---|---|---|
Arabidopsis thaliana | Arabidopsis | 157 | n = 5 | Phytozome v9.0 | 35,386 |
Phytozome v10.0 | 35,386 | ||||
Glycine max | Soybean | 1,115 | n = 20 | Phytozome v9.0 | 73,320 |
Phytozome v10.0 | 88,647 | ||||
Medicago truncatula | Barrel medic | 470 | n = 8 | Mt 4.0 v1 | 62,319 |
Phaseolus vulgaris | Common bean | 625 | n = 11 | Phytozome v9.0 | 31,638 |
Phytozome v10.0 | 31,638 | ||||
Lotus japonicus | Birdsfoot trefoil | 471 | n = 6 | Release 2.5 | 38,482 |
Cajanus cajan | Pigeon pea | 833 | n =11 | Nov. 6, 2011 | 48,680 |