From: Novel applications of motif-directed profiling to identify disease resistance genes in plants
complete reads (#) | bulk* specific K-mers (#) | R gene family with highest homology | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
BR | BS | BR | BS | BR | BS | BR | BS | BR | BS | |
 |  | >= 2 |  | >= 7 |  | >= 12 |  | >= 15 |  | |
17990 | 29516 | 128 | 256 | 0 | 20 | 0 | 1 | 0 | 0 | Mi-1.2/Rpi-blb2 |
14848 | 28044 | 68 | 298 | 0 | 21 | 0 | 0 | 0 | 0 | Hero |
13487 | 23565 | 172 | 439 | 37 | 70 | 18 | 9 | 3 | 3 | I-2/R3a/R3b |
1427 | 2320 | 81 | 150 | 0 | 3 | 0 | 0 | 0 | 0 | RB/Rpi-blb1/Rpi-pta1/Rpi-sto1 |
1228 | 2520 | 53 | 223 | 0 | 0 | 0 | 0 | 0 | 0 | R1 |
1230 | 2011 | 64 | 99 | 0 | 0 | 0 | 0 | 0 | 0 | Rpi-blb3/R2/Rpi-abpt1 |
277 | 516 | 14 | 29 | 0 | 0 | 0 | 0 | 0 | 0 | NRC1 |
293 | 402 | 6 | 146 | 0 | 33 | 0 | 0 | 0 | 0 | Rpi-chc1 |
209 | 362 | 0 | 25 | 0 | 2 | 0 | 0 | 0 | 0 | Sw-5a |
207 | 283 | 5 | 10 | 0 | 3 | 0 | 0 | 0 | 0 | Rx/Gpa2 |
43 | 43 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Prf1 |
22 | 31 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Tm-2/Rpi-vnt1 |
1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | N |
51240 | 89583 | Â | Â | Â | Â | Â | Â | Â | Â | total (E-value < e-20)** |
88475 | 150513 | 591 | 1675 | 37 | 152 | 18 | 10 | 3 | 3 | total |