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Table 2 Contingency matrices model TFBS over-representation

From: Using an ensemble of statistical metrics to quantify large sets of plant transcription factor binding sites

 

G a

G a ¯

 

t i

c i (0,0)

c i (1,0)

n(t i )

t i ¯

c i (0,1)

c i (1,1)

n( t i ¯ )

 

n(G a )

n( G a ¯ )

N

  1. TFBS abundance within specific groups can be modeled as a two-dimensional contingency matrix, c i .
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Plant Methods

ISSN: 1746-4811